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Comprehensive analysis of clonal TCR repertoire in patients with ankylosing spondylitis and HLA-B27+ healthy donors
P. 55-55.
Komech E. A., Zvyagin I. V., Nazarov V.I., Pogorelyy M. V., Mamedov I. Z., Lebedev Y. B.
Comprehensive analysis of clonal TCR repertoire in patients with ankylosing spondylitis and HLA-B27+ healthy donors using
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English
In book
Issue 1: Special Issue. , M. : Park Media Ltd, 2014
M. : IITP RAS, 2021
10th Moscow Conference on Computational Molecular Biology MCCMB'21
ISBN 978-5-901158-32-6 ...
Added: September 10, 2021
Kurnosov A. A., Ustyugova S. V., Nazarov V. et al., Plos One 2015 Vol. 10 No. 2 P. e0117854
Retroelement activity is a common source of polymorphisms in human genome. The mechanism whereby retroelements contribute to the intraindividual genetic heterogeneity by inserting into the DNA of somatic cells is gaining increasing attention. Brain tissues are suspected to accumulate genetic heterogeneity as a result of the retroelements somatic activity. This study aims to expand our ...
Added: February 19, 2015
Minervina A. A., Komkov A. Y., Kurnosov A. A. et al., The FEBS Journal 2015 Vol. 282 No. Special Issue: 40th FEBS Congress, The Biochemical Basis of Life, Berlin, Germany, July 4-9, 2015 P. 170-170
Retroelements (RE) comprise substantial part of mammalian genomes including humans. However, only a minor part of genomic elements are still active giving rise to new germline and somatic insertions in the genomes of normal and malignant cells. Somatic mosaicism resulted from new RE insertions is speculated to play a significant role in adult neurogenesis in ...
Added: September 2, 2015
Fomichov V. A., , in : Natural Language Processing and Information Systems. 18th International Conference on Applications of Natural Language to Information Systems, NLDB 2013, Salford, UK, June 2013. Proceedings. Issue LNCS 7934.: Dordrecht, L., Heidelberg, NY : Springer, 2013. P. 249-259.
The paper formulates the problem of constructing a broadly applicable and flexible Conceptual Metagrammar (CM). It is to be a collection of the rules enabling us to construct step by step a semantic representation (or text meaning representation) of practically arbitrary sentence or discourse pertaining to mass spheres of human’s professional activity. The opinion is ...
Added: November 27, 2013
Bukley G., St. Petersburg : Федеральное государственное автономное образовательное учреждение высшего образования "Санкт-Петербургский политехнический университет Петра Великого", 2021
Bioinformatics Institute 2020/21. Project abstracts. Bioinformatics Summer School 2021. Abstracts. ...
Added: August 14, 2021
М. : ИБХ РАН, 2015
Сборник тезисов конференции. ...
Added: February 14, 2015
Nazarov V. I., Pogorelyy M. V., Zvyagin I. V. et al., , in : Abstract Book of the 4th European Congress of Immunology. : Вена : [б.и.], 2015. P. 435-435.
Added: September 13, 2015
Komech E. A., Zvyagin I. V., Pogorelyy M. V. et al., , in : Abstract Book of the 4th European Congress of Immunology. : Вена : [б.и.], 2015. P. 119-119.
Added: September 13, 2015
Pogorelyy M. V., Nazarov V.I., Komech E. A. et al., , in : Acta Naturae. International conference on bioorganic chemistry, biotechnology and bionanotechnology. Issue 1: Special Issue.: M. : Park Media Ltd, 2014. P. 38-38.
In this conference poster we present a novel software packare for R programming environment developed for T-cell receptoire repertoire data analysis. ...
Added: September 15, 2014
Комеч Е. А., Звягин И. В., Погорелый М. В. et al., В кн. : Перспективные направления физико-химической биологии и биотехнологии: сборник тезисов XXVI зимней молодежной научной школы. : М. : Издательство Института биоорганической химии, 2014. С. 112-112.
Added: August 3, 2014
Grigory Andreevich Puzanov, Scientific Reports 2022 Vol. 12 No. 1 Article 14588
Clear cell renal carcinoma has been reported in many research studies as a rather heterogeneous disease. Identification of different subtypes and their molecular characteristics can help in choosing a more effective treatment and predicting a response to it. In this study, using multi-omics clustering of RNA-Seq data of patients with clear cell renal carcinoma from ...
Added: September 23, 2022
Konstantinovskiy N., Smirnov D., Holger P., , in : ИНСТИТУТ БИОИНФОРМАТИКИ. СБОРНИК ТЕЗИСОВ 2020/21. : St. Petersburg : Федеральное государственное автономное образовательное учреждение высшего образования "Санкт-Петербургский политехнический университет Петра Великого", 2021. P. 24-24.
Added: August 9, 2021
Погорелый М. В., Комеч Е. А., Назаров В.И. et al., В кн. : Перспективные направления физико-химической биологии и биотехнологии: сборник тезисов XXVI зимней молодежной научной школы. : М. : Издательство Института биоорганической химии, 2014. С. 113-113.
...
Added: August 3, 2014
Fomichov V. A., , in : Actes de la 18e conference sur le Traitement Automatique des Langues Naturels. Actes de la 15e Rencontre des Etudiants Cercheurs en Informatique pour le Traitement Automatique des Langues. France, Montpellie, 27th June - 1st July 2011. Vol. 1: Actes: articles longs.: Montpellier : AVL Diffusion, 2011. P. 5-20.
The paper describes the structure and possible applications of the theory of K-representations (knowledge representations) in bioinformatics and in the development of a Semantic Web of a new generation. It is an original theory of designing semantic-syntactic analyzers of natural language (NL) texts with the broad use of formal means for representing input, intermediary, and ...
Added: March 22, 2013
St. Petersburg : Федеральное государственное автономное образовательное учреждение высшего образования "Санкт-Петербургский политехнический университет Петра Великого", 2021
Bioinformatics Institute 2020/21. Project abstracts. Bioinformatics Summer School 2021. Abstracts. ...
Added: August 9, 2021
M. : Park Media Ltd, 2014
Added: September 15, 2014
Shugay M., Bagaev D., Turchaninova M. et al., PLoS Computational Biology 2015 Vol. 11 No. 11 P. e1004503
Despite the growing number of immune repertoire sequencing studies, the field still lacks software for analysis and comprehension of this high-dimensional data. Here we report VDJtools, a complementary software suite that solves a wide range of T cell receptor (TCR) repertoires post-analysis tasks, provides a detailed tabular output and publication-ready graphics, and is built on ...
Added: February 17, 2016
Dordrecht, L., Heidelberg, NY : Springer, 2012
This volume covers some of the topics that are related to the rapidly growing field of biomedical informatics. In June 11–12, 2010 a workshop entitled ‘Optimization and Data Analysis in Biomedical Informatics’ was organized at The Fields Institute. Following this event, invited contributions were gathered based on the talks presented at the workshop, and additional ...
Added: January 30, 2013
Isaev E., Kornilov V., Математическая биология и биоинформатика 2013 Т. 8 № 1 С. 49-65
Today we have the problem of big science data. The information collecting in science experiments, especially in bioinformatics and astrophysics grows in amazing rate. In this paper we consider special program techniques and computer technologies used for work with superlarge volumes of data. Also, we discuss the state of affairs with the big data in ...
Added: March 3, 2013
Konstantinovskiy N., Kirillova E., Cherniatchik R., , in : ИНСТИТУТ БИОИНФОРМАТИКИ. СБОРНИК ТЕЗИСОВ 2020/21. : St. Petersburg : Федеральное государственное автономное образовательное учреждение высшего образования "Санкт-Петербургский политехнический университет Петра Великого", 2021. P. 59-60.
Added: August 9, 2021
Nazarov V. I., Minervina A. A., Komkov A. Y. et al., Bone Marrow Transplantation 2016 Vol. 1 No. 3
Detection of minimal residual disease (MRD) is a powerful prognostic tool in many hematological malignancies including ALL.1 Several groups of markers are widely used to monitor the concentration of a malignant clone including the detection of 'clonal B-cell (BCR) or T-cell (TCR) gene receptor rearrangements2 in ALL. Identification of a clonal rearrangement specific for the ...
Added: June 14, 2016
Nazarov V. I., Новые информационные технологии в автоматизированных системах 2015 С. 270-280
В данной статье дается обзор существующих методов анализа данных репертуаров иммунных рецепторов - фундамента адаптивного иммунитета млекопитающих. ...
Added: April 18, 2015
М. : Издательство Института биоорганической химии, 2014
...
Added: August 3, 2014