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pIPredict: a computer tool for prediction of isoelectric points of peptides and proteins.
Biochemistry, Supplemental Series B. 2015. Vol. 9. No. 3. P. 296–303.
Skvortsov V. S., Alekseytchuk N. N., Khudyakov D. V., Romero Reyes I.
Shaitan A., Ke Y., Hongjun Y. et al., PLoS Computational Biology 2026 Article e1013836
The interaction between peptides and human leukocyte antigen class II (HLA-II)
molecules plays a pivotal role in adaptive immune responses, as HLA-II mediates
the recognition of exogenous antigens and initiates T cell activation through peptide
presentation. Accurate prediction of peptide-HLA-II binding serves as a cornerstone
for deciphering cellular immune responses, and is essential for guiding the optimization
of antibody therapeutics. ...
Added: September 7, 2026
Neznanov A., Kuznetsov S., Glushko A. et al., , in: Data Analytics and Management in Data Intensive Domains: 25th International Conference, DAMDID/RCDL 2023, Moscow, Russia, October 24–27, 2023, Revised Selected PapersVol. 2086: Communications in Computer and Information Science.: Springer, 2024.
This paper provides an overview of tool for computational experiments, which are utilized in the realm of compound property analysis. Moreover, it outlines the initial outcomes of developing a novel research toolbox system that concentrates on exploring the interpretability and explainability of machine learning outcomes. The proposed solution
is based on open-source tools and offers a convenient approach to address specific ...
Added: October 30, 2024
El-Mowafi S. A., Konshina A. G., Mohammed E. H. et al., Molecules 2023 Vol. 28 No. 24 Article 8049
In our ongoing quest to design effective antimicrobial peptides (AMPs), this study aimed to elucidate the mechanisms governing cyclic amphiphilic AMPs and their interactions with membranes. The objective was to discern the nature of these interactions and understand how peptide sequence and structure influence antimicrobial activity. We introduced modifications into the established cyclic AMP peptide, ...
Added: September 15, 2024
Arbenin A., Petrov A., Nazarov D. et al., Chemosensors 2022 Vol. 10 No. 10 Article 433
The spherical diffusion that occurs when using ultramicroelectrodes (i.e., electrodes with a characteristic size of 1–10 µm) contributes to a higher mass transfer rate. This leads to equalization of the depletion rates of the near-electrode layer due to the electrochemical reaction and to the supply of the product from the solution depth. This is the ...
Added: November 1, 2022