• A
  • A
  • A
  • АБВ
  • АБВ
  • АБВ
  • A
  • A
  • A
  • A
  • A
Обычная версия сайта
  • RU
  • EN
  • HSE University
  • Publications
  • Articles
  • Central loop of non-conventional toxin WTX from Naja kaouthia is important for interaction with nicotinic acetylcholine receptors
  • RU
  • EN
Расширенный поиск
Высшая школа экономики
Национальный исследовательский университет
Priority areas
  • business informatics
  • economics
  • engineering science
  • humanitarian
  • IT and mathematics
  • law
  • management
  • mathematics
  • sociology
  • state and public administration
by year
  • 2028
  • 2027
  • 2026
  • 2025
  • 2024
  • 2023
  • 2022
  • 2021
  • 2020
  • 2019
  • 2018
  • 2017
  • 2016
  • 2015
  • 2014
  • 2013
  • 2012
  • 2011
  • 2010
  • 2009
  • 2008
  • 2007
  • 2006
  • 2005
  • 2004
  • 2003
  • 2002
  • 2001
  • 2000
  • 1999
  • 1998
  • 1997
  • 1996
  • 1995
  • 1994
  • 1993
  • 1992
  • 1991
  • 1990
  • 1989
  • 1988
  • 1987
  • 1986
  • 1985
  • 1984
  • 1983
  • 1982
  • 1981
  • 1980
  • 1979
  • 1978
  • 1977
  • 1976
  • 1975
  • 1974
  • 1973
  • 1972
  • 1971
  • 1970
  • 1969
  • 1968
  • 1967
  • 1966
  • 1965
  • 1964
  • 1963
  • 1958
  • More
Subject
News
September 18, 2026
When Pictures Hinder Understanding: Illustrations May Impede Learning of Abstract Ideas
Illustrations can help remember specific actions but do not always make abstract ideas easier to learn. Researchers from HSE University and Humboldt University compared how people learn from texts with different levels of abstractness. They found that participants remembered illustrations better and performed better on related tasks after reading a multimedia text about yoga asanas than after reading an abstract text about the Nash equilibrium. The findings could help improve the selection of illustrations for educational and informational materials. The study has been published in Learning and Instruction.
September 17, 2026
'I Wish That People Would Place Greater Trust in Science'
When Tatiana Eremicheva chose Fundamental and Computational Linguistics as her field of study, she thought it would be about learning languages. Instead, she discovered it was about helping people. In this interview for the HSE Young Scientists project, she discusses science as a way of understanding the world, billiards as a team-building activity, and why learning to read is not always as easy as it seems.
September 15, 2026
Immunity to Chaos: How Personal Resources Help Us Cope with the Challenges of a Turbulent World
International conflicts, crises and digital overload—the modern world puts our minds to the test every day. Traditional psychology often focuses on the consequences: anxiety, depression, and psychosomatic disorders. But what if we looked at the problem differently—through the lens of the resources that prevent us from breaking down? Psychological immunity is precisely this set of resources. Alena Zolotareva and her group, Psychological Immunity as a Resource for Positive Functioning, are developing an integrative model of this phenomenon, adapting diagnostic tools and preparing for large-scale empirical research. Why do psychologists need to collaborate with medical professionals, and how could their research transform preventive care in clinics and corporations?

 

Have you spotted a typo?
Highlight it, click Ctrl+Enter and send us a message. Thank you for your help!

Publications
  • Books
  • Articles
  • Chapters of books
  • Working papers
  • Report a publication
  • Research at HSE

?

Central loop of non-conventional toxin WTX from Naja kaouthia is important for interaction with nicotinic acetylcholine receptors

Toxicon. 2016. Vol. 119. No. September . P. 274–279.
Lyukmanova E. N., Shulepko M. A., Shenkarev Z. O., Kasheverov I. E., Chugunov A. O., Kulbatskii D. S., Myshkin M. Y., Utkin Y. N., Efremov R., Tsetlin V. I., Arseniev A. S., Kirpichnikov M. P., Dolgikh D. A.

Highlights

 

•

Mutagenesis of non-conventional toxin WTX from Naja kaouthia is performed.

•

Activity of WTX and its mutants on muscle-type and α7-type of nAChRs was studied.

•

R31 and R32 from the loop II is important for binding to both types of receptors.

•

Modeling revealed the loop II entering into the orthosteric site of the α7 nAChRs.

 


Abstract

‘Three-finger’ toxin WTX from Naja kaouthia interacts with nicotinic and muscarinic acetylcholine receptors (nAChRs and mAChRs). Mutagenesis and competition experiments with 125I-α-bungarotoxin revealed that Arg31 and Arg32 residues from the WTX loop II are important for binding to Torpedo californica and human α7 nAChRs. Computer modeling suggested that loop II occupies the orthosteric binding site at α7 nAChR. The similar toxin interface was previously described as a major determinant of allosteric interactions with mAChRs.

 

Language: English
DOI
Keywords: computer modelingnicotinic acetylcholine receptorThree-finger proteinSnake neurotoxinLy-6/uPARSite-directed mutagenesis

Similar publications
Липид-опосредованная адаптация белков и пептидов в клеточных мембранах
Полянский А. А., Efremov R., Биологические мембраны 2024 Т. 41 № 4 С. 403–421
The paper overviews the results of computational studies of the molecular mechanisms underlying the adaptation of model cell membranes taking place during their interaction with proteins and peptides. We discuss changes in the structural and dynamic parameters of the water–lipid environment, the hydrophobic/ hydrophilic organization of the lipid bilayer surface (the so-called “mosaicity”), etc. Taken together, these effects are ...
Added: September 19, 2024
Crystal Structure of Bright Fluorescent Protein BrUSLEE with Subnanosecond Fluorescence Lifetime; Electric and Dynamic Properties
Goryacheva E., Efremov R., Krylov N. et al., International Journal of Molecular Sciences 2023 Vol. 24 No. 7 Article 6403
The rapid development of new microscopy techniques for cell biology has exposed the need for genetically encoded fluorescent tags with special properties. Fluorescent biomarkers of the same color and spectral range and different fluorescent lifetimes (FLs) became useful for fluorescent lifetime image microscopy (FLIM). One such tag, the green fluorescent protein BrUSLEE (Bright Ultimately Short Lifetime Enhanced Emitter), having ...
Added: May 19, 2023
Structure-Based Rational Design of Small α-Helical Peptides with Broad-Spectrum Activity Against Multidrug-Resistant Pathogens
Lohan S., Konshina A. G., Efremov R. et al., Journal of Medicinal Chemistry 2023 Vol. 66 No. 1 P. 855–874
A series of small (7- to 12-mer) amphipathic cationic peptides were designed and synthesized with the ultimate goal of creating a set of short helical peptides with broad-range bactericidal activity and good selectivity toward the bacterial cells. Activity analysis identified a lead 12-mer peptide 8b with broad spectrum activity against Gram-positive (MIC=3.1-6.2 µg/mL) and Gram-negative ...
Added: February 21, 2023
The Mechanism of Selective Recognition of Lipid Substrate by hDHHC20 Enzyme
Panina I., Krylov N., Chugunov A. et al., International Journal of Molecular Sciences 2022 Vol. 23 Article 14791
S-acylation is a post-translational linkage of long chain fatty acids to cysteines, playing a key role in normal physiology and disease. In human cells, the reaction is catalyzed by a family of 23 membrane DHHC-acyltransferases (carrying an Asp-His-His-Cys catalytic motif) in two stages: (1) acyl-CoA-mediated autoacylation of the enzyme; and (2) further transfer of the ...
Added: December 9, 2022
Моделирование широкополосного усилителя на печатной плате с диэлектриком повышенной проводимости
Абрамешин Д.А., Пожидаев Е.Д., Саенко В.С. et al., Известия вузов. Электроника. РФ 2022 Т. 27 № 5 С. 635–644
The electrons of the cosmic plasma act on spacecraft, causing the electrification of their dielectric materials. The result of the accumulation of charge is the occurrence of electrostatic discharges leading to failures in the operation of on-board radio electronics, and this phenomenon significantly reduces the duration of the active existence of spacecraft. One of the ...
Added: November 2, 2022
ICCTA '22: Proceedings of the 2022 8th International Conference on Computer Technology Applications
NY: Association for Computing Machinery (ACM), 2022.
On behalf of the Conference Committee, we welcome you to the 8th International Conference on Computer Technology Applications (ICCTA 2022). It is organized by FH JOANNEUM, one of the leading universities of applied sciences in Austria. After a long break, caused by the COVID-19 pandemic, the conference is held in presence, in the beautiful city ...
Added: September 26, 2022
SimDB in Action: Road Traffic Simulations Completely Inside Array DBMS
Rodriges Zalipynis R. A., PROCEEDINGS OF THE VLDB ENDOWMENT 2022 Vol. 15 No. 12 P. 3742–3745
Array DBMSs operate on big N-d arrays. Cellular automata (CA) work on a discrete lattice of cells, essentially on N-d arrays. CA facilitate decision support as they realistically simulate complex phenomena including road traffic, fire spread, and urban growth. Array DBMSs can bring numerous benefits to the CA domain via a ``database approach'': powerful parallelization, ...
Added: August 30, 2022
The Method of Fault Tolerance Evaluation of Reconfigurable Navigation System
Y. N. Kofanov, V. M. N., N. E. K. et al., , in: Proceedings of 2022 IEEE Moscow Workshop on Electronic and Networking Technologies (MWENT).: M.: IEEE, 2022. P. 1–6.
he method of research and evaluation of fault tolerance of the navigation system of a passenger aircraft is described. The system should have a very high reliability, provided under the influence of such external factors as factors of electromagnetic, thermal and mechanical nature. The method uses structural reconfiguration aimed at increasing reliability by increasing fault tolerance, when ...
Added: July 7, 2022
Engineering Methodology for the Selection of a Composite Polymer Dielectric that Ensures the Absence of Electrostatic Discharges in the Design of the Onboard Electronic Equipment of the Spacecraft
D. Abrameshin, S. Tumkovskiy, V. Saenko et al., , in: Proceedings of 2022 IEEE Moscow Workshop on Electronic and Networking Technologies (MWENT).: M.: IEEE, 2022. P. 1–4.
Added: July 5, 2022
Method of Computer Simulation of Thermal Processes in Optoelectronic Devices
Kuznetsov N., Kofanov Y. N., , in: Proceedings of the 2021 IEEE International Conference "Quality Management, Transport and Information Security, Information Technologies" (IT&QM&IS).: IEEE, 2021. P. 443–447.
Taking into account the functional and design features of optoelectronic devices, this paper proposes to divide the process of developing their thermal macromodels into several stages related to the idealization of the design and the purpose of isothermal volumes. The authors also considered the principle of transition to topological thermal models of structural elements of an ...
Added: January 4, 2022
Biochemical basis of skin disease Mal de Meleda: SLURP-1 mutants differently affect keratinocyte proliferation and apoptosis
Shulepko M., Bychkov M., Shenkarev Z. et al., Journal of Investigative Dermatology 2021 P. 1–9
Mal de Meleda is an autosomal recessive palmoplantar keratoderma associated with mutations in a gene encoding SLURP-1. SLURP-1 controls growth, differentiation, and apoptosis of keratinocytes by interaction with α7-type nicotinic acetylcholine receptors. SLURP-1 has a three-finger structure with a β-structural core (head) and three prolonged loops (fingers). To determine the role of SLURP-1 mutations, we produced 22 mutant variants of the protein, ...
Added: May 18, 2021
ABO Blood Group Antigens as a Model of Studying Protein-Protein Interactions
Gylmiyarova F., Ryskina E.A., Kolotyeva N. et al., , in: Blood Groups.: IntechOpen, 2019. Ch. 5 P. 63–77.
This work presents a research of intermolecular interactions on the example of the antigen antibody interactions of the ABO system. This model could be successfully used in the future due to the lack of knowledge in the area of the ABO antigen’s behavior as a biomolecule and the integration of these structures into chain of ...
Added: October 23, 2020
Probing temperature and capsaicin-induced activation of TRPV1 channel via computationally guided point mutations in its pore and TRP domains
Лубова К., Chugunov A., Волынский П. et al., International Journal of Biological Macromolecules 2020 Vol. 158 P. 1175–1183
In a recent computational study, we revealed some mechanistic aspects of TRPV1 (transient receptor potential channel 1) thermal activation and gating and proposed a set of probable functionally important residues — “hot spots” that have not been characterized experimentally yet. In this work, we analyzed TRPV1 point mutants G643A, I679A + A680G, and K688G/P combining molecular modeling, ...
Added: June 10, 2020
Which cytochrome P450 metabolizes phenazepam? Step by step in silico, in vitro, and in vivo studies
Ivashchenko D., Rudik A., Poloznikov A. et al., Drug Metabolism and Personalized Therapy 2018 Vol. 33 No. 2 P. 65–73
Phenazepam (bromdihydrochlorphenylbenzodiazepine) is the original Russian benzodiazepine tranquilizer belonging to 1,4-benzodiazepines. There is still limited knowledge about phenazepam's metabolic liver pathways and other pharmacokinetic features. To determine phenazepam's metabolic pathways, the study was divided into three stages: In silico modeling, in vitro experiment (cell culture study), and in vivo confirmation. In silico modeling was performed ...
Added: April 15, 2020
ИССЛЕДОВАНИЕ ВОЗМОЖНОСТЕЙ ПЕРЕЛЕТА МЕЖДУ ОРБИТАМИ ВОКРУГ ТОЧЕК ЛАГРАНЖА L2 И L1 В СИСТЕМЕ СОЛНЦЕ-ЗЕМЛЯ
Bober S. A., Aksenov S. A., В кн.: XII Всероссийский съезд по фундаментальным проблемам теоретической и прикладной механикиТ. 1: Общая и прикладная механика.: Уфа: РИЦ БашГУ, 2019. С. 461–463.
Added: January 23, 2020
Formal Description of Possible Input Logical Signal Data Sequences for Digital Systems and Their Blocks
Ivannikov A.D., Levchenko N., Romanova I.I., , in: Proceedings of IEEE East-West Design & Test Symposium (EWDTS'2018).: IEEE Computer Society, 2018. Ch. 8524675 P. 1–5.
Digital LSI circuits, and digital blocks in many cases fulfill a succession of operation from limited collection. In this paper computer modeling of LSI logical circuits represents logical signals on the pins. For a computer-aided design it is very important to develop the collection of tests for digital LSI circuits for proving the successfulness of design. The most productive and economical test ...
Added: November 15, 2019
The Foresight Modeling in Ensuring High Quality of Space Electronic Equipment
Kofanov Y. N., Sotnikova S., , in: 2019 International Seminar on Electron Devices Design and Production (SED).: IEEE, 2019. P. 1–6.
The methods under the generalized name Foresight have proven to be the most effective tool for selecting long-term priorities in science and technology in various industries, the success of which ultimately effects the socio-economic development of the country. The strategic forecast in the humanitarian and technical areas often relies on statistical modeling (extrapolation to the ...
Added: June 24, 2019
Математическое и компьютерное моделирование в экономике, страховании и управлении рисками: Материалы VII Международной молодежной научно-практической конференции
Саратов: ООО "Издательство "Научная книга", 2018.
В сборнике опубликованы материалы VII Международной молодежной научно-практической конференции "Маитематическое и компьютерное моделирование в экономике, страховании и управлении рисками". Тематика статей затрагивает круг вопросов, связанных с экономико-математическим и компьютерным моделированием и управлением рисками в финансовой деятельности, страховании, банковском деле, инвестировании, государственном управлении экономикой, бизнес-информатике и других разделах экономико-математических знаний. Для сотрудников банков, финансовых и страховых компаний, ...
Added: April 5, 2019
Extended Modeling of Banks’ Credit Ratings
Karminsky A. M., Khromova E., Procedia Computer Science 2016 Vol. 91 P. 201–210
The aim of this paper is to construct a reliable model based on public information for  the practical usage of interested agents, regulators and banks themselves. During the work,  a table of representative variables that have potential influence on ratings was constructed.  The research is based on the Bankscope database that contains financial information about  international banks for the ...
Added: January 12, 2018
The program for selection of vertical forming-, filling- and sealing machines for dry product packing in soft package, based on the criteria analysis method
Savenkova I., Journal of International Scientific Publications: Materials, Methods & Technology 2012 Vol. 6 P. 182–189
Added: September 20, 2017
Structural Insight into Specificity of Interactions between Non-conventional Three-Finger Toxin WTX and Muscarinic Acetylcholine Receptors
Lyukmanova E., Shenkarev Z., Shulepko M. et al., Journal of biological chemistry 2015 Vol. 290 P. 23616–23630
Weak toxin from Naja kaouthia (WTX) belongs to the group of nonconventional “three-finger” snake neurotoxins. It irreversibly inhibits nicotinic acetylcholine receptors and allosterically interacts with muscarinic acetylcholine receptors (mAChRs). Using site-directed mutagenesis, NMR spectroscopy, and computer modeling, we investigated the recombinant mutant WTX analogue (rWTX) which, compared with the native toxin, has an additional N-terminal methionine residue. ...
Added: March 14, 2017
Central loop of non-conventional toxin WTX from Naja kaouthia is important for interaction with nicotinic acetylcholine receptors.
Lyukmanova E., Shulepko M., Shenkarev Z. et al., Toxicon 2016 Vol. 119 P. 274–279
‘Three-finger’ toxin WTX from Naja kaouthia interacts with nicotinic and muscarinic acetylcholine receptors (nAChRs and mAChRs). Mutagenesis and competition experiments with 125I-α-bungarotoxin revealed that Arg31 and Arg32 residues from the WTX loop II are important for binding to Torpedo californica and human α7 nAChRs. Computer modeling suggested that loop II occupies the orthosteric binding site at α7 nAChR. The similar ...
Added: March 14, 2017
  • About
  • About
  • Key Figures & Facts
  • Sustainability at HSE University
  • Faculties & Departments
  • International Partnerships
  • Faculty & Staff
  • HSE Buildings
  • HSE University for Persons with Disabilities
  • Public Enquiries
  • Studies
  • Admissions
  • Programme Catalogue
  • Undergraduate
  • Graduate
  • Exchange Programmes
  • Summer University
  • Summer Schools
  • Semester in Moscow
  • Business Internship
  • Research
  • International Laboratories
  • Research Centres
  • Research Projects
  • Monitoring Studies
  • Conferences & Seminars
  • Academic Jobs
  • Yasin (April) International Academic Conference on Economic and Social Development
  • Media & Resources
  • Publications by staff
  • HSE Journals
  • Publishing House
  • iq.hse.ru: commentary by HSE experts
  • Library
  • Economic & Social Data Archive
  • Video
  • HSE Repository of Socio-Economic Information
  • HSE1993–2026
  • Contacts
  • Copyright
  • Privacy Policy
  • Site Map
Edit